CDS
| Accession Number | TCMCG075C26058 |
| gbkey | CDS |
| Protein Id | XP_017982877.1 |
| Location | complement(join(5320944..5321180,5321297..5321472,5322597..5322732,5323084..5323246,5323842..5323987,5324844..5325069,5326320..5326542,5326811..5326959,5327884..5327990,5328663..5328734,5328820..5328867,5329334..5329477,5329595..5329682,5329807..5330005,5330898..5331078,5331961..5332035,5332353..5332482,5332592..5332727,5332860..5333196)) |
| Gene | LOC18591983 |
| GeneID | 18591983 |
| Organism | Theobroma cacao |
Protein
| Length | 990aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA341501 |
| db_source | XM_018127388.1 |
| Definition | PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2 [Theobroma cacao] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGGAAGCAATTTTTATGAGAATGTGGCTCTGCCCCAAACGGTGGAAGGAGCAATCTCCAGAATCTGTCGTGAGCAGAACCAACCGCCACTTGCCGACTCGACGAGGCAGGCGCTTGCTGATAAAGGCGAAGAACCATCTTTAAGGATTCTAAAGAAAATCCAACGGACGACAATTCGTTCTTCATTTGATGGATTTGTCATGTACATGATCAAGAACGAACCAAACAACATCAACAGTCCAAAACGACAAAGTCCTTCTTCTTCTTCTCCTTCAAGACTAAGTCGTAGTCCCTTTTCTTCGCCCGCCAAAACTTGCTGTCTTATGATGCAGCAAGATGTTGTTACCACTATTGGTCCTCCTTGGAGTTCTTCATTGAATGTTGGCAAAGAAGAAAGGTTTAGCCCTCAGTTGGTGGCTTTGGGGGCGCTTGAGTTTAGAAAAGCTTTCCTCATTTTAAATTACATTGGCTCGGAAACGTTGGAAGAAGTAACTACAGCTGATGGAATTCGAAGATTAAAAGATTTGGCAATGGATAAGTTTGAGGAAGAGGTCTGGGTTACTCTGGGCCAACGGTATAACAATCCAGATGATCGTTGTAAGTCAGTTGATTGGGAGTCTGGAAAGGCATATCAGTACCATTGTCATGTATCTGCAAATGGGAGTTGTAGGTTCAAGGGGCCTTATTTGGAAACAAGTAGAAATCATCTACAAAGGGTTTTAGGAGATGAGAATATTCTCATCGTGAAGTTTGCAAATGTCACAGATGGTAAAACTTCGGCTGGCAATGTTTGTTATGCTGAGTACAAGAAAATTGCATTAGGACTTCTTGTTGGTTTGCGTCGTTACCGGTTTTTTGTGTTTAAGGATGGGGGCAAAGAAGCAAGAAAGAAAGACCCAACTTCCTCATCTGTTAGGTGCTTATTTGTTCGATTGGAGTCAAATGCATCTATTGATGATGGTAAAGATTATGTTTTGTCTGGGAAAACAATACAAGAAGCCAGATGTGTCTTTATGCATGTCCATACTGTATCCAATATGGCTAAGTATATGGCCAGATTGTCGCTGATCTTATCTAAGACCATGAAGCTGGAAGTTGATTTAGCTGATGTAAACGTTGTGGTGATAAATGATATACCTTGCCAGGATAAATATGGAAATTATGTTTATAAAAAAGATGGAGAACCTTGTATTCACACAGATGGAACTGGTTATATATCAGAGGATTTGGCTTTGAAATGCCCAAAGAATGTCTTTAAAGGAAGGATTTTGAATGGTGACAATGATGAGGGCAAGTTTTCAGACATGAAATCAACAGAATCTCACCATAGAGTACCGCCTTTGCTGATCCAGTTCCGCCTCTTTAACAAAGGTTGTGCCGTCAAGGGAACCTTACTTGTCAATAAAAAGCTTCCACCCAGAACCATTCAAATTCGTCCTTCCATGATTAAAGTTATGCCAGATCCAAATCTGGCAAACATGTACACAATGAATTCACTGGAAGTAGTTGCAACAAGCAATCAACCAAAGAGAACTTCTCTTTCAAGGAATTTGATTGCACTCCTTAGCTATGGAGGTGTCCCGGACGACTTTTTTATGGACATATTGAAGAATGCATTAGAAGAGTCACAGAGTGCTTTCTCCAATAAACGCAGAGCACTTAAAGTTTCGCTTAATAATGGTGGCAAGGATGATTTCAGTGCAGCAAAAATGATTTTATCAGGGATTTCCCTTGATGAATCATATCTGCAACATCAGCTGTCAATAATGTTAAATGAAGAAAGGAAGGGTCTTCTAGGAGGAAAGCTCCCTATGACTGAGTCTTATTATTTAATGGGTACTGTTGATCCAACTGGAGTCCTAGAAAGTGATCAAGTCAGCATTATCTTGGACAATGGACAGATTTCTGGGAAAGTGCTAGTGTTCCGCCAACCTGGTGTACATTTTGGAGATGTACATTTGCTAAATGCTAGATATGTGGAATCCTTGAATGAATATGTAGGACATGCCAAGTATGCTATATTCTTTCCTTGTAAAGGCCCACGTTCTTTGGCTGATGAGATGGCTGGGGGTGATTTTGACGGCGATACGTATTTTGTATCAAAAAATCCCCAGTTATTGGATTACTTCAAAGTGAGTGAACCCTGGACGGAAAATTCTTCTACTTGTGGAGTGTCCACTAAGGGACCATGTGAGTTTTCAAACGAGGAGTTGGAGGATGAGCTCTTCAAATTATTCTTGAGAACTAGGTTTCAGCCAAGTAATGCTATGGCCATTGCATCGGATAACTGTATGGCAGTAATGGATCGCTTACTAACACTGGAAGATAGTAACTCTCCAGAGGAATTTCTTTTGAAGAAGAACCTACAACGTTTGATTGATTTATATTATGAGTCTTTGGATGCACCAAAGACTGGAAAAAAGATTGAAGTTCCACGAGAATTGAGGGCCGATGCATTTCCTCATTATTTGGAACGGCAAAAGTCTTTCAAATCAACTTCTATATTGGGAAAAATTTATGATTTTGTCAAATCATATGGAGAAGAACTGCCAAGGAAAGAAGTCCGAAAGCTCCCTTGTTTCGATGTTGGTTTTCCTCAAGATTGCAGAGAAAAATGGACTGAACTTTATAAGCAGTATAGGGAAGACATGACGCAAACTCTGCAAACTCTGGATGGCAAGAGCAAAGAACTGAGAGATGTGGCTGCTAATGCTGTTTATAACAAATACAAGCAGGAATTGTATGGAGGTGCTGTGTTGGAGCAGAGACAAAGGCCTCTGGACCAAATCTATAAGGAGGCGCTTGCCATTTACAACATTTCCTATGATTATGCCATTAGAATTGATGACGTGGGAAAATGCGGATTTGCTTGGAAAGTGGCAGGCTCAGCGCTCTTAAGTTTGTATGCCTCGGAGCAAGGGGAAAAGACATTGTCATGTGCACCTTCTGTTTTGAAAGAGCTCTTTCGGTGA |
| Protein: MGSNFYENVALPQTVEGAISRICREQNQPPLADSTRQALADKGEEPSLRILKKIQRTTIRSSFDGFVMYMIKNEPNNINSPKRQSPSSSSPSRLSRSPFSSPAKTCCLMMQQDVVTTIGPPWSSSLNVGKEERFSPQLVALGALEFRKAFLILNYIGSETLEEVTTADGIRRLKDLAMDKFEEEVWVTLGQRYNNPDDRCKSVDWESGKAYQYHCHVSANGSCRFKGPYLETSRNHLQRVLGDENILIVKFANVTDGKTSAGNVCYAEYKKIALGLLVGLRRYRFFVFKDGGKEARKKDPTSSSVRCLFVRLESNASIDDGKDYVLSGKTIQEARCVFMHVHTVSNMAKYMARLSLILSKTMKLEVDLADVNVVVINDIPCQDKYGNYVYKKDGEPCIHTDGTGYISEDLALKCPKNVFKGRILNGDNDEGKFSDMKSTESHHRVPPLLIQFRLFNKGCAVKGTLLVNKKLPPRTIQIRPSMIKVMPDPNLANMYTMNSLEVVATSNQPKRTSLSRNLIALLSYGGVPDDFFMDILKNALEESQSAFSNKRRALKVSLNNGGKDDFSAAKMILSGISLDESYLQHQLSIMLNEERKGLLGGKLPMTESYYLMGTVDPTGVLESDQVSIILDNGQISGKVLVFRQPGVHFGDVHLLNARYVESLNEYVGHAKYAIFFPCKGPRSLADEMAGGDFDGDTYFVSKNPQLLDYFKVSEPWTENSSTCGVSTKGPCEFSNEELEDELFKLFLRTRFQPSNAMAIASDNCMAVMDRLLTLEDSNSPEEFLLKKNLQRLIDLYYESLDAPKTGKKIEVPRELRADAFPHYLERQKSFKSTSILGKIYDFVKSYGEELPRKEVRKLPCFDVGFPQDCREKWTELYKQYREDMTQTLQTLDGKSKELRDVAANAVYNKYKQELYGGAVLEQRQRPLDQIYKEALAIYNISYDYAIRIDDVGKCGFAWKVAGSALLSLYASEQGEKTLSCAPSVLKELFR |